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* installing *source* package ‘numDeriv’ ...
** package ‘numDeriv’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (numDeriv)
* installing *source* package ‘SQUAREM’ ...
** package ‘SQUAREM’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SQUAREM)
* installing *source* package ‘listenv’ ...
** package ‘listenv’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (listenv)
* installing *source* package ‘parallelly’ ...
** package ‘parallelly’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (parallelly)
* installing *source* package ‘globals’ ...
** package ‘globals’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (globals)
* installing *source* package ‘later’ ...
** package ‘later’ successfully unpacked and MD5 sums checked
** using staged installation
Running configure script
-latomic linker flag not needed.
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c callback_registry.cpp -o callback_registry.o
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/mem_fn.hpp:25:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/mem_fn.hpp:22,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/bind.hpp:26,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:1:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template<class T> T * get_pointer(std::auto_ptr<T> const& p)
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/get_pointer.hpp:14,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/mem_fn.hpp:25,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/mem_fn.hpp:22,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/bind.hpp:26,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:28:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from callback_registry.cpp:2:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/detail/shared_count.hpp:356:33: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/get_pointer.hpp:14,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/mem_fn.hpp:25,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/mem_fn.hpp:22,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/bind.hpp:26,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.cpp:2:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:256:65: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/get_pointer.hpp:14,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/mem_fn.hpp:25,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/mem_fn.hpp:22,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/bind.hpp:26,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.cpp:2:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:471:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/get_pointer.hpp:14,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/mem_fn.hpp:25,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/mem_fn.hpp:22,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/bind.hpp:26,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.cpp:2:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:484:22: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/get_pointer.hpp:14,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/mem_fn.hpp:25,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/mem_fn.hpp:22,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/bind.hpp:26,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.cpp:2:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:567:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> & r )
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/get_pointer.hpp:14,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/mem_fn.hpp:25,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/mem_fn.hpp:22,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/bind.hpp:26,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.cpp:2:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:576:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> && r )
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/get_pointer.hpp:14,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/mem_fn.hpp:25,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/mem_fn.hpp:22,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/bind.hpp:26,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from callback_registry.cpp:2:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:578:38: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/get_pointer.hpp:14,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/mem_fn.hpp:25,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/mem_fn.hpp:22,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/bind.hpp:26,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind.hpp:22,
from callback_registry.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c debug.cpp -o debug.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c later.cpp -o later.o
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:28:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from later.h:5,
from later.cpp:1:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/detail/shared_count.hpp:356:33: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from later.h:5,
from later.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from later.h:5,
from later.cpp:1:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:256:65: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from later.h:5,
from later.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from later.h:5,
from later.cpp:1:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:471:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from later.h:5,
from later.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from later.h:5,
from later.cpp:1:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:484:22: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from later.h:5,
from later.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from later.h:5,
from later.cpp:1:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:567:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> & r )
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from later.h:5,
from later.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from later.h:5,
from later.cpp:1:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:576:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> && r )
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from later.h:5,
from later.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from later.h:5,
from later.cpp:1:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:578:38: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from later.h:5,
from later.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/mem_fn.hpp:25:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/mem_fn.hpp:22,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/detail/prologue.hpp:18,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function.hpp:30,
from callback_registry.h:7,
from later.h:6,
from later.cpp:1:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/get_pointer.hpp: At global scope:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template<class T> T * get_pointer(std::auto_ptr<T> const& p)
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from later.h:5,
from later.cpp:1:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c later_posix.cpp -o later_posix.o
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:28:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from later.h:5,
from later_posix.cpp:9:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/detail/shared_count.hpp:356:33: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
^~~~~~~~
In file included from /usr/include/c++/7/bits/locale_conv.h:41:0,
from /usr/include/c++/7/locale:43,
from /usr/include/c++/7/iomanip:43,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/RcppCommon.h:52,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from later.h:5,
from later_posix.cpp:9:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:256:65: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
^~~~~~~~
In file included from /usr/include/c++/7/bits/locale_conv.h:41:0,
from /usr/include/c++/7/locale:43,
from /usr/include/c++/7/iomanip:43,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/RcppCommon.h:52,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from later.h:5,
from later_posix.cpp:9:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:471:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/7/bits/locale_conv.h:41:0,
from /usr/include/c++/7/locale:43,
from /usr/include/c++/7/iomanip:43,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/RcppCommon.h:52,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from later.h:5,
from later_posix.cpp:9:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:484:22: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/7/bits/locale_conv.h:41:0,
from /usr/include/c++/7/locale:43,
from /usr/include/c++/7/iomanip:43,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/RcppCommon.h:52,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from later.h:5,
from later_posix.cpp:9:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:567:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> & r )
^~~~~~~~
In file included from /usr/include/c++/7/bits/locale_conv.h:41:0,
from /usr/include/c++/7/locale:43,
from /usr/include/c++/7/iomanip:43,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/RcppCommon.h:52,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from later.h:5,
from later_posix.cpp:9:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:576:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> && r )
^~~~~~~~
In file included from /usr/include/c++/7/bits/locale_conv.h:41:0,
from /usr/include/c++/7/locale:43,
from /usr/include/c++/7/iomanip:43,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/RcppCommon.h:52,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from later.h:5,
from later_posix.cpp:9:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:578:38: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
^~~~~~~~
In file included from /usr/include/c++/7/bits/locale_conv.h:41:0,
from /usr/include/c++/7/locale:43,
from /usr/include/c++/7/iomanip:43,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/RcppCommon.h:52,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/mem_fn.hpp:25:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/mem_fn.hpp:22,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/detail/prologue.hpp:18,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function.hpp:30,
from callback_registry.h:7,
from later.h:6,
from later_posix.cpp:9:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/get_pointer.hpp: At global scope:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template<class T> T * get_pointer(std::auto_ptr<T> const& p)
^~~~~~~~
In file included from /usr/include/c++/7/bits/locale_conv.h:41:0,
from /usr/include/c++/7/locale:43,
from /usr/include/c++/7/iomanip:43,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/RcppCommon.h:52,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include/Rcpp.h:27,
from later_posix.cpp:3:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c later_win32.cpp -o later_win32.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c timer_posix.cpp -o timer_posix.o
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/bind/mem_fn.hpp:25:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/mem_fn.hpp:22,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/detail/prologue.hpp:18,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function.hpp:30,
from timer_posix.h:6,
from timer_posix.cpp:6:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template<class T> T * get_pointer(std::auto_ptr<T> const& p)
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/function_base.hpp:16,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/detail/prologue.hpp:17,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function.hpp:30,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:28:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timer_posix.h:8,
from timer_posix.cpp:6:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/detail/shared_count.hpp:356:33: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/function_base.hpp:16,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/detail/prologue.hpp:17,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function.hpp:30,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timer_posix.h:8,
from timer_posix.cpp:6:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:256:65: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/function_base.hpp:16,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/detail/prologue.hpp:17,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function.hpp:30,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timer_posix.h:8,
from timer_posix.cpp:6:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:471:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/function_base.hpp:16,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/detail/prologue.hpp:17,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function.hpp:30,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timer_posix.h:8,
from timer_posix.cpp:6:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:484:22: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/function_base.hpp:16,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/detail/prologue.hpp:17,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function.hpp:30,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timer_posix.h:8,
from timer_posix.cpp:6:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:567:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> & r )
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/function_base.hpp:16,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/detail/prologue.hpp:17,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function.hpp:30,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timer_posix.h:8,
from timer_posix.cpp:6:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:576:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> && r )
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/function_base.hpp:16,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/detail/prologue.hpp:17,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function.hpp:30,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timer_posix.h:8,
from timer_posix.cpp:6:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:578:38: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/function_base.hpp:16,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function/detail/prologue.hpp:17,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/function.hpp:30,
from timer_posix.h:6,
from timer_posix.cpp:6:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c timestamp_unix.cpp -o timestamp_unix.o
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:28:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/detail/shared_count.hpp:356:33: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:256:65: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:471:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:484:22: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:567:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> & r )
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:576:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
shared_ptr & operator=( std::auto_ptr<Y> && r )
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
In file included from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17:0,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:578:38: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
^~~~~~~~
In file included from /usr/include/c++/7/memory:80:0,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/config/no_tr1/memory.hpp:21,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/smart_ptr/shared_ptr.hpp:23,
from /home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include/boost/shared_ptr.hpp:17,
from timestamp.h:4,
from timestamp_unix.cpp:4:
/usr/include/c++/7/bits/unique_ptr.h:51:28: note: declared here
template<typename> class auto_ptr;
^~~~~~~~
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c timestamp_win32.cpp -o timestamp_win32.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tinycthread.c -o tinycthread.o
g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o later.so RcppExports.o callback_registry.o debug.o init.o later.o later_posix.o later_win32.o timer_posix.o timestamp_unix.o timestamp_win32.o tinycthread.o -pthread -L/usr/lib/R/lib -lR
installing to /home/peter/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-later/00new/later/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (later)
* installing *source* package ‘gower’ ...
** package ‘gower’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c R_register_native.c -o R_register_native.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gower.c -o gower.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o gower.so R_register_native.o gower.o -fopenmp -L/usr/lib/R/lib -lR
installing to /home/peter/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-gower/00new/gower/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (gower)
* installing *source* package ‘modeldata’ ...
** package ‘modeldata’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (modeldata)
* installing *source* package ‘htmlwidgets’ ...
** package ‘htmlwidgets’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Failed with error: ‘there is no package called ‘shiny’’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (htmlwidgets)
* installing *source* package ‘hexbin’ ...
** package ‘hexbin’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gfortran -fno-optimize-sibling-calls -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -c hbin.f -o hbin.o
gfortran -fno-optimize-sibling-calls -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -c hcell.f -o hcell.o
gfortran -fno-optimize-sibling-calls -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -c herode.f -o herode.o
gfortran -fno-optimize-sibling-calls -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -c hsm.f -o hsm.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c reg.c -o reg.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o hexbin.so hbin.o hcell.o herode.o hsm.o reg.o -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR
installing to /home/peter/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-hexbin/00new/hexbin/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (hexbin)
* installing *source* package ‘data.table’ ...
** package ‘data.table’ successfully unpacked and MD5 sums checked
** using staged installation
gcc -std=gnu99 7.5.0
zlib 1.2.11 is available ok
R CMD SHLIB supports OpenMP without any extra hint
** libs
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c assign.c -o assign.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c between.c -o between.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bmerge.c -o bmerge.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c chmatch.c -o chmatch.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cj.c -o cj.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c coalesce.c -o coalesce.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dogroups.c -o dogroups.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fastmean.c -o fastmean.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fcast.c -o fcast.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fifelse.c -o fifelse.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fmelt.c -o fmelt.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c forder.c -o forder.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c frank.c -o frank.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fread.c -o fread.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c freadR.c -o freadR.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c froll.c -o froll.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c frollR.c -o frollR.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c frolladaptive.c -o frolladaptive.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fsort.c -o fsort.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fwrite.c -o fwrite.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fwriteR.c -o fwriteR.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gsumm.c -o gsumm.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ijoin.c -o ijoin.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c inrange.c -o inrange.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c nafill.c -o nafill.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c nqrecreateindices.c -o nqrecreateindices.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c openmp-utils.c -o openmp-utils.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c quickselect.c -o quickselect.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rbindlist.c -o rbindlist.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c reorder.c -o reorder.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c shift.c -o shift.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c snprintf.c -o snprintf.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c subset.c -o subset.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c transpose.c -o transpose.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c types.c -o types.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c uniqlist.c -o uniqlist.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c vecseq.c -o vecseq.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fopenmp -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c wrappers.c -o wrappers.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o fsort.o fwrite.o fwriteR.o gsumm.o ijoin.o init.o inrange.o nafill.o nqrecreateindices.o openmp-utils.o quickselect.o rbindlist.o reorder.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -lz -L/usr/lib/R/lib -lR
PKG_CFLAGS = -fopenmp
PKG_LIBS = -fopenmp -lz
if [ "data.table.so" != "datatable.so" ]; then mv data.table.so datatable.so; fi
if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id datatable.so datatable.so; fi
installing to /home/peter/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-data.table/00new/data.table/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (data.table)
* installing *source* package ‘warp’ ...
** package ‘warp’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c boundary.c -o boundary.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c change.c -o change.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c coercion.c -o coercion.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c date.c -o date.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c distance.c -o distance.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c divmod.c -o divmod.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c get.c -o get.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c timezone.c -o timezone.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o warp.so boundary.o change.o coercion.o date.o distance.o divmod.o get.o init.o timezone.o utils.o -L/usr/lib/R/lib -lR
installing to /home/peter/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-warp/00new/warp/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (warp)
* installing *source* package ‘padr’ ...
** package ‘padr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c padr_init.c -o padr_init.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c round_down_core.cpp -o round_down_core.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c round_down_core_prev.cpp -o round_down_core_prev.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c round_up_core.cpp -o round_up_core.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c round_up_core_prev.cpp -o round_up_core_prev.o
g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o padr.so RcppExports.o padr_init.o round_down_core.o round_down_core_prev.o round_up_core.o round_up_core_prev.o -L/usr/lib/R/lib -lR
installing to /home/peter/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-padr/00new/padr/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (padr)
* installing *source* package ‘anytime’ ...
** package ‘anytime’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include" -DRCPP_NO_RTTI -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/BH/include" -DRCPP_NO_RTTI -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c anytime.cpp -o anytime.o
g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o anytime.so RcppExports.o anytime.o -L/usr/lib/R/lib -lR
installing to /home/peter/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-anytime/00new/anytime/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (anytime)
* installing *source* package ‘snakecase’ ...
** package ‘snakecase’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (snakecase)
* installing *source* package ‘PerformanceAnalytics’ ...
** package ‘PerformanceAnalytics’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c MCAHelper.c -o MCAHelper.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c comomentsEstimators.c -o comomentsEstimators.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c comomentsHelper.c -o comomentsHelper.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o PerformanceAnalytics.so MCAHelper.o comomentsEstimators.o comomentsHelper.o init.o -L/usr/lib/R/lib -lR
installing to /home/peter/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-PerformanceAnalytics/00new/PerformanceAnalytics/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (PerformanceAnalytics)
* installing *source* package ‘lazyeval’ ...
** package ‘lazyeval’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c expr.c -o expr.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c interp.c -o interp.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c lazy.c -o lazy.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c name.c -o name.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/usr/lib/R/lib -lR
installing to /home/peter/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-lazyeval/00new/lazyeval/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (lazyeval)
* installing *source* package ‘Quandl’ ...
** package ‘Quandl’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Quandl)
* installing *source* package ‘riingo’ ...
** package ‘riingo’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (riingo)
* installing *source* package ‘lava’ ...
** package ‘lava’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (lava)
* installing *source* package ‘future’ ...
** package ‘future’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (future)
* installing *source* package ‘crosstalk’ ...
** package ‘crosstalk’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (crosstalk)
* installing *source* package ‘promises’ ...
** package ‘promises’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/later/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/later/include" -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c promise_task.cpp -o promise_task.o
g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o promises.so RcppExports.o promise_task.o -L/usr/lib/R/lib -lR
installing to /home/peter/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-promises/00new/promises/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (promises)
* installing *source* package ‘slider’ ...
** package ‘slider’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/vctrs/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c block.c -o block.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/vctrs/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c compare.c -o compare.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/vctrs/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c hop.c -o hop.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/vctrs/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c index.c -o index.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/vctrs/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/vctrs/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c names.c -o names.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/vctrs/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c params.c -o params.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/vctrs/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slide-period.c -o slide-period.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/vctrs/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slide.c -o slide.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/vctrs/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slider-vctrs-private.c -o slider-vctrs-private.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/vctrs/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slider-vctrs-public.c -o slider-vctrs-public.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/vctrs/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o slider.so block.o compare.o hop.o index.o init.o names.o params.o slide-period.o slide.o slider-vctrs-private.o slider-vctrs-public.o utils.o -L/usr/lib/R/lib -lR
installing to /home/peter/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-slider/00new/slider/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (slider)
* installing *source* package ‘janitor’ ...
** package ‘janitor’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (janitor)
* installing *source* package ‘prodlim’ ...
** package ‘prodlim’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c GMLE.c -o GMLE.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c IntIndex.c -o IntIndex.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c icens_prodlim.c -o icens_prodlim.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c icens_prodlim_ml.c -o icens_prodlim_ml.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c iindex.c -o iindex.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c life_table.c -o life_table.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c loo.c -o loo.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c neighborhood.c -o neighborhood.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c predict.c -o predict.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c predict_individual_survival.c -o predict_individual_survival.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c prodlim.c -o prodlim.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c prodlim_clustersurv.c -o prodlim_clustersurv.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c prodlim_comprisk.c -o prodlim_comprisk.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c prodlim_multistates.c -o prodlim_multistates.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c prodlim_surv.c -o prodlim_surv.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sindex.c -o sindex.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I"/home/peter/R/x86_64-pc-linux-gnu-library/3.6/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c summary_prodlim.c -o summary_prodlim.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o prodlim.so GMLE.o IntIndex.o icens_prodlim.o icens_prodlim_ml.o iindex.o init.o life_table.o loo.o neighborhood.o predict.o predict_individual_survival.o prodlim.o prodlim_clustersurv.o prodlim_comprisk.o prodlim_multistates.o prodlim_surv.o sindex.o summary_prodlim.o -L/usr/lib/R/lib -lR
installing to /home/peter/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-prodlim/00new/prodlim/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (prodlim)
* installing *source* package ‘furrr’ ...
** package ‘furrr’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
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* DONE (furrr)
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** package ‘plotly’ successfully unpacked and MD5 sums checked
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** demo
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*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
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* DONE (plotly)
* installing *source* package ‘ipred’ ...
** package ‘ipred’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c SdiffKM.c -o SdiffKM.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-V28x5H/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o ipred.so SdiffKM.o init.o -L/usr/lib/R/lib -lR
installing to /home/peter/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-ipred/00new/ipred/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ipred)
* installing *source* package ‘rsample’ ...
** package ‘rsample’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rsample)
* installing *source* package ‘recipes’ ...
** package ‘recipes’ successfully unpacked and MD5 sums checked
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*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
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* DONE (recipes)
* installing *source* package ‘timetk’ ...
** package ‘timetk’ successfully unpacked and MD5 sums checked
** using staged installation
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** data
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*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
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* installing *source* package ‘alphavantager’ ...
** package ‘alphavantager’ successfully unpacked and MD5 sums checked
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*** installing help indices
** building package indices
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* installing *source* package ‘tidyquant’ ...
** package ‘tidyquant’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
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*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
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* DONE (tidyquant)
The downloaded source packages are in
‘/tmp/Rtmp90aT2i/downloaded_packages’
install.packages("tidyquant")
Installing package into ‘/home/peter/R/x86_64-pc-linux-gnu-library/3.6’
(as ‘lib’ is unspecified)
trying URL 'https://cloud.r-project.org/src/contrib/tidyquant_1.0.2.tar.gz'
Content type 'application/x-gzip' length 3623431 bytes (3.5 MB)
==================================================
downloaded 3.5 MB
* installing *source* package ‘tidyquant’ ...
** package ‘tidyquant’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (tidyquant)
The downloaded source packages are in
‘/tmp/Rtmp90aT2i/downloaded_packages’
library(tidyverse)
library(tidyquant)
Loading required package: lubridate
Attaching package: ‘lubridate’
The following objects are masked from ‘package:base’:
date, intersect, setdiff, union
Loading required package: PerformanceAnalytics
Loading required package: xts
Loading required package: zoo
Attaching package: ‘zoo’
The following objects are masked from ‘package:base’:
as.Date, as.Date.numeric
Attaching package: ‘xts’
The following objects are masked from ‘package:dplyr’:
first, last
Attaching package: ‘PerformanceAnalytics’
The following object is masked from ‘package:graphics’:
legend
Loading required package: quantmod
Loading required package: TTR
Registered S3 method overwritten by 'quantmod':
method from
as.zoo.data.frame zoo
══ Need to Learn tidyquant? ════════════════════════════════════════════════════════════════════════════════════════════════════
Business Science offers a 1-hour course - Learning Lab #9: Performance Analysis & Portfolio Optimization with tidyquant!
</> Learn more at: https://university.business-science.io/p/learning-labs-pro </>
library(tidyquant)
library(timetk)
Look at the example data
FANG
The adjusted column contains the adjusted closing prices for each day.
FANG %>%
group_by(symbol) %>%
plot_time_series(date, adjusted, .facet_ncol = 2, .interactive = FALSE)
The volume column contains the trade volume (number of times the stock was transacted) for the day.
FANG %>%
group_by(symbol) %>%
plot_time_series(date, volume, .facet_ncol = 2, .interactive = FALSE)
Objective: Get the total trade volume by quarter
FANG %>%
group_by(symbol) %>%
summarise_by_time(
date, .by = "quarter",
volume = SUM(volume)
) %>%
plot_time_series(date, volume, .facet_ncol = 2, .interactive = FALSE, .y_intercept = 0)
Objective: Get the first value in each month
FANG %>%
group_by(symbol) %>%
summarise_by_time(
date, .by = "month",
adjusted = FIRST(adjusted)
) %>%
plot_time_series(date, adjusted, .facet_ncol = 2, .interactive = FALSE)
Objective: Get the adjusted stock prices in the 3rd quarter of 2013.
FANG %>%
group_by(symbol) %>%
filter_by_time(date, "2013-09", "2013") %>%
plot_time_series(date, adjusted, .facet_ncol = 2, .interactive = FALSE)
Objective: Make an irregular series regular.
FANG %>%
group_by(symbol) %>%
pad_by_time(date, .by = "auto") # Guesses .by = "day"
pad applied on the interval: day
pad applied on the interval: day
pad applied on the interval: day
pad applied on the interval: day
Objective: Go from Daily to Hourly timestamp intervals for 1 month from the start date. Impute the missing values.
FANG %>%
group_by(symbol) %>%
pad_by_time(date, .by = "hour") %>%
mutate_at(vars(open:adjusted), .funs = ts_impute_vec, period = 1) %>%
filter_by_time(date, "start", FIRST(date) %+time% "1 month") %>%
plot_time_series(date, adjusted, .facet_ncol = 2, .interactive = FALSE)
Objective: Calculate a “centered” simple rolling average with partial window rolling and the start and end windows.
# Make the rolling function
roll_avg_30 <- slidify(.f = AVERAGE, .period = 30, .align = "center", .partial = TRUE)
# Apply the rolling function
FANG %>%
select(symbol, date, adjusted) %>%
group_by(symbol) %>%
# Apply Sliding Function
mutate(rolling_avg_30 = roll_avg_30(adjusted)) %>%
pivot_longer(cols = c(adjusted, rolling_avg_30)) %>%
plot_time_series(date, value, .color_var = name,
.facet_ncol = 2, .smooth = FALSE,
.interactive = FALSE)
Objective: Calculate a rolling regression.
# Rolling regressions are easy to implement using `.unlist = FALSE`
lm_roll <- slidify(~ lm(..1 ~ ..2 + ..3), .period = 90,
.unlist = FALSE, .align = "right")
FANG %>%
select(symbol, date, adjusted, volume) %>%
group_by(symbol) %>%
mutate(numeric_date = as.numeric(date)) %>%
# Apply rolling regression
mutate(rolling_lm = lm_roll(adjusted, volume, numeric_date)) %>%
filter(!is.na(rolling_lm))
NA